STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM90238.1ABC-2 type transport system permease protein. (270 aa)    
Predicted Functional Partners:
SHM90273.1
ABC-2 type transport system ATP-binding protein.
 
  0.967
SHM96114.1
ABC-2 type transport system permease protein.
 
 
 0.846
SHM90301.1
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family.
       0.723
SHM90330.1
Sulfonate transport system substrate-binding protein.
       0.620
SHM61222.1
ABC-2 type transport system permease protein.
  
  
  0.546
SHM46830.1
ABC-2 type transport system permease protein.
  
  
  0.525
SHM46790.1
ABC-2 type transport system ATP-binding protein.
 
  0.515
SHN30987.1
Teichoic acid transport system permease protein.
    
  0.498
SHL30400.1
ABC-2 type transport system ATP-binding protein.
 
  0.488
SHM30580.1
Lipooligosaccharide transport system ATP-binding protein.
 
  0.480
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.