STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM91891.1Hypothetical protein. (194 aa)    
Predicted Functional Partners:
SHN36451.1
Hypothetical protein.
  
     0.773
SHM91774.1
Cupin.
       0.563
SHM91796.1
Methyltransferase domain-containing protein.
       0.563
SHM91825.1
UDP-glucuronate decarboxylase.
       0.563
SHM91850.1
Predicted dehydrogenase.
       0.563
SHN32300.1
Hypothetical protein.
  
     0.552
SHM91665.1
Glycine hydroxymethyltransferase.
   
   0.540
SHM86222.1
Histidine kinase-like ATPase domain-containing protein.
  
     0.532
SHM91749.1
Choline dehydrogenase.
  
 
  0.503
SHM91686.1
Glycosyl transferases group 1.
       0.497
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.