STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM95586.1Protein of unknown function. (290 aa)    
Predicted Functional Partners:
SHN10044.1
Ribosomal peptide maturation radical SAM protein 1.
  
     0.645
SHM33619.1
Hypothetical protein.
  
     0.609
SHN29194.1
Hyaluronan synthase.
  
     0.544
SHN30586.1
Pentapeptide repeat-containing protein.
  
     0.539
SHM21883.1
Fusaric acid resistance protein-like.
  
     0.538
SHM95614.1
Hypothetical protein.
       0.528
SHM95556.1
Hypothetical protein.
       0.493
SHN08924.1
FtsX-like permease family protein.
  
     0.492
SHM46951.1
Nitrate/nitrite transporter NarK.
  
     0.491
SHN35949.1
Low temperature requirement protein LtrA.
  
     0.487
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.