STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM95922.1CubicO group peptidase, beta-lactamase class C family. (348 aa)    
Predicted Functional Partners:
SHM95837.1
Hypothetical protein.
       0.886
SHM95866.1
Hypothetical protein.
       0.886
SHM95894.1
Hypothetical protein.
       0.886
SHM95811.1
Hypothetical protein.
       0.871
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.644
SHK70549.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
     
 0.515
SHM11972.1
Amino acid adenylation domain-containing protein.
  
  
 0.484
SHN09255.1
CubicO group peptidase, beta-lactamase class C family.
  
   
 0.468
SHM95947.1
Dihydrolipoamide dehydrogenase.
       0.466
SHM10340.1
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein.
     
 0.457
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.