STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM97204.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
SHM97149.1
Hypothetical protein.
       0.773
SHM97178.1
Hypothetical protein.
       0.773
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.621
SHM46911.1
Endoglucanase.
  
 
  0.617
SHM97096.1
Hypothetical protein.
    
  0.555
SHM95128.1
3',5'-cyclic AMP phosphodiesterase CpdA.
    
  0.531
SHM97121.1
Hypothetical protein.
       0.458
SHL07725.1
N-acetylmuramoyl-L-alanine amidase.
   
 
  0.409
SHM97231.1
Hypothetical protein.
       0.401
SHM97258.1
Hypothetical protein.
       0.401
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.