Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK96844.1 | SHN01548.1 | SAMN05216499_102204 | SAMN05216499_11864 | Putative ABC transport system permease protein. | TIGR03086 family protein. | 0.505 |
SHL23780.1 | SHL94862.1 | SAMN05216499_103180 | SAMN05216499_10775 | Predicted dithiol-disulfide oxidoreductase, DUF899 family. | Winged helix DNA-binding domain-containing protein. | 0.477 |
SHL23780.1 | SHN01548.1 | SAMN05216499_103180 | SAMN05216499_11864 | Predicted dithiol-disulfide oxidoreductase, DUF899 family. | TIGR03086 family protein. | 0.412 |
SHL94862.1 | SHL23780.1 | SAMN05216499_10775 | SAMN05216499_103180 | Winged helix DNA-binding domain-containing protein. | Predicted dithiol-disulfide oxidoreductase, DUF899 family. | 0.477 |
SHL94862.1 | SHN01548.1 | SAMN05216499_10775 | SAMN05216499_11864 | Winged helix DNA-binding domain-containing protein. | TIGR03086 family protein. | 0.463 |
SHM44820.1 | SHN01548.1 | SAMN05216499_11150 | SAMN05216499_11864 | TIGR03086 family protein. | TIGR03086 family protein. | 0.521 |
SHN01508.1 | SHN01530.1 | SAMN05216499_11862 | SAMN05216499_11863 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG. | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.541 |
SHN01508.1 | SHN01548.1 | SAMN05216499_11862 | SAMN05216499_11864 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG. | TIGR03086 family protein. | 0.541 |
SHN01530.1 | SHN01508.1 | SAMN05216499_11863 | SAMN05216499_11862 | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG. | 0.541 |
SHN01530.1 | SHN01548.1 | SAMN05216499_11863 | SAMN05216499_11864 | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily. | TIGR03086 family protein. | 0.843 |
SHN01548.1 | SHK96844.1 | SAMN05216499_11864 | SAMN05216499_102204 | TIGR03086 family protein. | Putative ABC transport system permease protein. | 0.505 |
SHN01548.1 | SHL23780.1 | SAMN05216499_11864 | SAMN05216499_103180 | TIGR03086 family protein. | Predicted dithiol-disulfide oxidoreductase, DUF899 family. | 0.412 |
SHN01548.1 | SHL94862.1 | SAMN05216499_11864 | SAMN05216499_10775 | TIGR03086 family protein. | Winged helix DNA-binding domain-containing protein. | 0.463 |
SHN01548.1 | SHM44820.1 | SAMN05216499_11864 | SAMN05216499_11150 | TIGR03086 family protein. | TIGR03086 family protein. | 0.521 |
SHN01548.1 | SHN01508.1 | SAMN05216499_11864 | SAMN05216499_11862 | TIGR03086 family protein. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG. | 0.541 |
SHN01548.1 | SHN01530.1 | SAMN05216499_11864 | SAMN05216499_11863 | TIGR03086 family protein. | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.843 |
SHN01548.1 | SHN29835.1 | SAMN05216499_11864 | SAMN05216499_13417 | TIGR03086 family protein. | TIGR03086 family protein. | 0.456 |
SHN29835.1 | SHN01548.1 | SAMN05216499_13417 | SAMN05216499_11864 | TIGR03086 family protein. | TIGR03086 family protein. | 0.456 |