node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN04097.1 | rplA | SAMN05216499_11910 | SAMN05216499_10197 | threonyl-tRNA synthetase. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.944 |
SHN04097.1 | rplC | SAMN05216499_11910 | SAMN05216499_101131 | threonyl-tRNA synthetase. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.955 |
SHN04097.1 | rplK | SAMN05216499_11910 | SAMN05216499_10196 | threonyl-tRNA synthetase. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.958 |
SHN04097.1 | rplO | SAMN05216499_11910 | SAMN05216499_101150 | threonyl-tRNA synthetase. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.972 |
SHN04097.1 | rplV | SAMN05216499_11910 | SAMN05216499_101136 | threonyl-tRNA synthetase. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.953 |
SHN04097.1 | rpmF | SAMN05216499_11910 | SAMN05216499_113119 | threonyl-tRNA synthetase. | LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family. | 0.950 |
SHN04097.1 | rpsB | SAMN05216499_11910 | SAMN05216499_11382 | threonyl-tRNA synthetase. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.946 |
SHN04097.1 | rpsL | SAMN05216499_11910 | SAMN05216499_101104 | threonyl-tRNA synthetase. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.947 |
SHN04097.1 | rpsO | SAMN05216499_11910 | SAMN05216499_11310 | threonyl-tRNA synthetase. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.965 |
SHN04097.1 | rpsZ | SAMN05216499_11910 | SAMN05216499_101144 | threonyl-tRNA synthetase. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.960 |
rplA | SHN04097.1 | SAMN05216499_10197 | SAMN05216499_11910 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | threonyl-tRNA synthetase. | 0.944 |
rplA | rplC | SAMN05216499_10197 | SAMN05216499_101131 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
rplA | rplK | SAMN05216499_10197 | SAMN05216499_10196 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplA | rplO | SAMN05216499_10197 | SAMN05216499_101150 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
rplA | rplV | SAMN05216499_10197 | SAMN05216499_101136 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
rplA | rpmF | SAMN05216499_10197 | SAMN05216499_113119 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family. | 0.999 |
rplA | rpsB | SAMN05216499_10197 | SAMN05216499_11382 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
rplA | rpsL | SAMN05216499_10197 | SAMN05216499_101104 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
rplA | rpsO | SAMN05216499_10197 | SAMN05216499_11310 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
rplA | rpsZ | SAMN05216499_10197 | SAMN05216499_101144 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.999 |