STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN08630.1Serine phosphatase RsbU, regulator of sigma subunit. (410 aa)    
Predicted Functional Partners:
SHN25216.1
Signal transduction histidine kinase.
  
 
 0.866
SHN25209.1
PAS domain S-box-containing protein.
 
  0.854
SHN04327.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
  0.811
SHL68236.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
  
  0.807
SHN31547.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.775
SHN02055.1
GAF domain-containing protein.
  
     0.769
SHN36016.1
PAS fold-containing protein.
  
     0.769
SHM07287.1
PAS/PAC sensor hybrid histidine kinase.
  
  0.735
SHM89836.1
Stage II sporulation protein E (SpoIIE).
  
     0.721
SHL99937.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.645
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.