STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN07986.1Peptide/nickel transport system substrate-binding protein. (551 aa)    
Predicted Functional Partners:
SHN08009.1
Peptide/nickel transport system permease protein.
 0.986
SHN08047.1
Peptide/nickel transport system permease protein.
 
 0.977
SHN29343.1
Peptide/nickel transport system permease protein.
 0.939
SHN29400.1
Peptide/nickel transport system permease protein.
 
 0.934
SHN08066.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.929
SHN20585.1
Peptide/nickel transport system permease protein.
 0.926
SHN20598.1
Peptide/nickel transport system permease protein.
 
 0.922
SHN36042.1
Peptide/nickel transport system permease protein.
 0.918
SHK71087.1
Oligopeptide transport system permease protein.
 0.914
SHK71297.1
Oligopeptide transport system permease protein.
 0.913
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.