STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN09569.1Two-component system, NarL family, response regulator LiaR. (152 aa)    
Predicted Functional Partners:
SHN25216.1
Signal transduction histidine kinase.
   
 0.989
SHN09549.1
PAS domain S-box-containing protein.
 
  0.962
SHN09528.1
Two component transcriptional regulator, LuxR family.
 
     0.953
SHN08220.1
Histidine kinase.
 
 0.864
SHL49044.1
Signal transduction histidine kinase.
  
  0.849
SHL02738.1
Histidine kinase.
  
  0.847
SHL57866.1
Signal transduction histidine kinase.
  
  0.843
SHL76490.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  0.842
SHL98153.1
Signal transduction histidine kinase.
  
  0.840
SHN16235.1
Signal transduction histidine kinase.
  
  0.837
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.