Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK96605.1 | SHN11318.1 | SAMN05216499_102197 | SAMN05216499_12129 | Dynamin family protein. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.573 |
SHK96605.1 | SHN11331.1 | SAMN05216499_102197 | SAMN05216499_12130 | Dynamin family protein. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.618 |
SHK96605.1 | cmk | SAMN05216499_102197 | SAMN05216499_12133 | Dynamin family protein. | Cytidylate kinase. | 0.738 |
SHM56965.1 | SHM59186.1 | SAMN05216499_11258 | SAMN05216499_112117 | Exodeoxyribonuclease-3. | Exodeoxyribonuclease III. | 0.935 |
SHM56965.1 | SHN11331.1 | SAMN05216499_11258 | SAMN05216499_12130 | Exodeoxyribonuclease-3. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.848 |
SHM59186.1 | SHM56965.1 | SAMN05216499_112117 | SAMN05216499_11258 | Exodeoxyribonuclease III. | Exodeoxyribonuclease-3. | 0.935 |
SHM59186.1 | SHN11331.1 | SAMN05216499_112117 | SAMN05216499_12130 | Exodeoxyribonuclease III. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.848 |
SHN11261.1 | SHN11275.1 | SAMN05216499_12125 | SAMN05216499_12126 | Alanine dehydrogenase. | Chromosome partitioning protein. | 0.810 |
SHN11261.1 | SHN11288.1 | SAMN05216499_12125 | SAMN05216499_12127 | Alanine dehydrogenase. | Hypothetical protein. | 0.753 |
SHN11261.1 | SHN11302.1 | SAMN05216499_12125 | SAMN05216499_12128 | Alanine dehydrogenase. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.720 |
SHN11261.1 | SHN11318.1 | SAMN05216499_12125 | SAMN05216499_12129 | Alanine dehydrogenase. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.720 |
SHN11261.1 | SHN11331.1 | SAMN05216499_12125 | SAMN05216499_12130 | Alanine dehydrogenase. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.720 |
SHN11275.1 | SHN11261.1 | SAMN05216499_12126 | SAMN05216499_12125 | Chromosome partitioning protein. | Alanine dehydrogenase. | 0.810 |
SHN11275.1 | SHN11288.1 | SAMN05216499_12126 | SAMN05216499_12127 | Chromosome partitioning protein. | Hypothetical protein. | 0.886 |
SHN11275.1 | SHN11302.1 | SAMN05216499_12126 | SAMN05216499_12128 | Chromosome partitioning protein. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.896 |
SHN11275.1 | SHN11318.1 | SAMN05216499_12126 | SAMN05216499_12129 | Chromosome partitioning protein. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.858 |
SHN11275.1 | SHN11331.1 | SAMN05216499_12126 | SAMN05216499_12130 | Chromosome partitioning protein. | 23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.823 |
SHN11288.1 | SHN11261.1 | SAMN05216499_12127 | SAMN05216499_12125 | Hypothetical protein. | Alanine dehydrogenase. | 0.753 |
SHN11288.1 | SHN11275.1 | SAMN05216499_12127 | SAMN05216499_12126 | Hypothetical protein. | Chromosome partitioning protein. | 0.886 |
SHN11288.1 | SHN11302.1 | SAMN05216499_12127 | SAMN05216499_12128 | Hypothetical protein. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.823 |
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