Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL09320.1 | SHM55599.1 | SAMN05216499_102525 | SAMN05216499_11224 | 4a-hydroxytetrahydrobiopterin dehydratase. | Methyltransferase domain-containing protein. | 0.603 |
SHL09320.1 | SHN12171.1 | SAMN05216499_102525 | SAMN05216499_12183 | 4a-hydroxytetrahydrobiopterin dehydratase. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.603 |
SHL40750.1 | SHN12171.1 | SAMN05216499_10464 | SAMN05216499_12183 | TIGR03083 family protein. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.446 |
SHL40750.1 | SHN22454.1 | SAMN05216499_10464 | SAMN05216499_1275 | TIGR03083 family protein. | Helix-turn-helix domain-containing protein. | 0.446 |
SHL45852.1 | SHN12171.1 | SAMN05216499_104185 | SAMN05216499_12183 | SnoaL-like domain-containing protein. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.646 |
SHM55599.1 | SHL09320.1 | SAMN05216499_11224 | SAMN05216499_102525 | Methyltransferase domain-containing protein. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.603 |
SHM55599.1 | SHN12171.1 | SAMN05216499_11224 | SAMN05216499_12183 | Methyltransferase domain-containing protein. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.603 |
SHM95271.1 | SHN12171.1 | SAMN05216499_11715 | SAMN05216499_12183 | Alcohol dehydrogenase. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.675 |
SHM95271.1 | SHN22454.1 | SAMN05216499_11715 | SAMN05216499_1275 | Alcohol dehydrogenase. | Helix-turn-helix domain-containing protein. | 0.784 |
SHN12134.1 | SHN12154.1 | SAMN05216499_12181 | SAMN05216499_12182 | Acyl dehydratase. | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase). | 0.580 |
SHN12134.1 | SHN12171.1 | SAMN05216499_12181 | SAMN05216499_12183 | Acyl dehydratase. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.453 |
SHN12134.1 | SHN12207.1 | SAMN05216499_12181 | SAMN05216499_12185 | Acyl dehydratase. | Acyl-homoserine lactone (AHL) acylase PvdQ. | 0.470 |
SHN12154.1 | SHN12134.1 | SAMN05216499_12182 | SAMN05216499_12181 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase). | Acyl dehydratase. | 0.580 |
SHN12154.1 | SHN12171.1 | SAMN05216499_12182 | SAMN05216499_12183 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase). | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.467 |
SHN12171.1 | SHL09320.1 | SAMN05216499_12183 | SAMN05216499_102525 | DNA-binding transcriptional regulator, XRE-family HTH domain. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.603 |
SHN12171.1 | SHL40750.1 | SAMN05216499_12183 | SAMN05216499_10464 | DNA-binding transcriptional regulator, XRE-family HTH domain. | TIGR03083 family protein. | 0.446 |
SHN12171.1 | SHL45852.1 | SAMN05216499_12183 | SAMN05216499_104185 | DNA-binding transcriptional regulator, XRE-family HTH domain. | SnoaL-like domain-containing protein. | 0.646 |
SHN12171.1 | SHM55599.1 | SAMN05216499_12183 | SAMN05216499_11224 | DNA-binding transcriptional regulator, XRE-family HTH domain. | Methyltransferase domain-containing protein. | 0.603 |
SHN12171.1 | SHM95271.1 | SAMN05216499_12183 | SAMN05216499_11715 | DNA-binding transcriptional regulator, XRE-family HTH domain. | Alcohol dehydrogenase. | 0.675 |
SHN12171.1 | SHN12134.1 | SAMN05216499_12183 | SAMN05216499_12181 | DNA-binding transcriptional regulator, XRE-family HTH domain. | Acyl dehydratase. | 0.453 |
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