STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN12171.1DNA-binding transcriptional regulator, XRE-family HTH domain. (281 aa)    
Predicted Functional Partners:
SHN12187.1
Methyltransferase domain-containing protein.
 
     0.681
SHM95271.1
Alcohol dehydrogenase.
      
 0.675
SHL45852.1
SnoaL-like domain-containing protein.
 
     0.646
SHL09320.1
4a-hydroxytetrahydrobiopterin dehydratase.
       0.603
SHM55599.1
Methyltransferase domain-containing protein.
       0.603
SHN12207.1
Acyl-homoserine lactone (AHL) acylase PvdQ.
       0.479
SHN22454.1
Helix-turn-helix domain-containing protein.
      
 0.479
SHN12154.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
       0.467
SHN12134.1
Acyl dehydratase.
 
     0.453
SHL40750.1
TIGR03083 family protein.
   
   0.446
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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