Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL02854.1 | SHN14676.1 | SAMN05216499_102358 | SAMN05216499_122120 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Hypothetical protein. | 0.603 |
SHL02854.1 | recO | SAMN05216499_102358 | SAMN05216499_102357 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.908 |
SHM32693.1 | SHN14676.1 | SAMN05216499_11065 | SAMN05216499_122120 | Protein of unknown function. | Hypothetical protein. | 0.601 |
SHN14666.1 | SHN14676.1 | SAMN05216499_122119 | SAMN05216499_122120 | Hypothetical protein. | Hypothetical protein. | 0.886 |
SHN14666.1 | SHN14690.1 | SAMN05216499_122119 | SAMN05216499_122121 | Hypothetical protein. | Hypothetical protein. | 0.531 |
SHN14666.1 | SHN14700.1 | SAMN05216499_122119 | SAMN05216499_122122 | Hypothetical protein. | ADP-ribose pyrophosphatase YjhB, NUDIX family. | 0.523 |
SHN14676.1 | SHL02854.1 | SAMN05216499_122120 | SAMN05216499_102358 | Hypothetical protein. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.603 |
SHN14676.1 | SHM32693.1 | SAMN05216499_122120 | SAMN05216499_11065 | Hypothetical protein. | Protein of unknown function. | 0.601 |
SHN14676.1 | SHN14666.1 | SAMN05216499_122120 | SAMN05216499_122119 | Hypothetical protein. | Hypothetical protein. | 0.886 |
SHN14676.1 | SHN14690.1 | SAMN05216499_122120 | SAMN05216499_122121 | Hypothetical protein. | Hypothetical protein. | 0.503 |
SHN14676.1 | SHN14700.1 | SAMN05216499_122120 | SAMN05216499_122122 | Hypothetical protein. | ADP-ribose pyrophosphatase YjhB, NUDIX family. | 0.503 |
SHN14676.1 | recO | SAMN05216499_122120 | SAMN05216499_102357 | Hypothetical protein. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.603 |
SHN14690.1 | SHN14666.1 | SAMN05216499_122121 | SAMN05216499_122119 | Hypothetical protein. | Hypothetical protein. | 0.531 |
SHN14690.1 | SHN14676.1 | SAMN05216499_122121 | SAMN05216499_122120 | Hypothetical protein. | Hypothetical protein. | 0.503 |
SHN14690.1 | SHN14700.1 | SAMN05216499_122121 | SAMN05216499_122122 | Hypothetical protein. | ADP-ribose pyrophosphatase YjhB, NUDIX family. | 0.960 |
SHN14700.1 | SHN14666.1 | SAMN05216499_122122 | SAMN05216499_122119 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Hypothetical protein. | 0.523 |
SHN14700.1 | SHN14676.1 | SAMN05216499_122122 | SAMN05216499_122120 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Hypothetical protein. | 0.503 |
SHN14700.1 | SHN14690.1 | SAMN05216499_122122 | SAMN05216499_122121 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Hypothetical protein. | 0.960 |
recO | SHL02854.1 | SAMN05216499_102357 | SAMN05216499_102358 | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.908 |
recO | SHN14676.1 | SAMN05216499_102357 | SAMN05216499_122120 | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | Hypothetical protein. | 0.603 |