STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN14070.1Transcriptional regulator, GntR family. (292 aa)    
Predicted Functional Partners:
SHN14080.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
 
     0.943
SHK56220.1
GntR family transcriptional regulator.
  
     0.569
SHK56915.1
Transcriptional regulator, GntR family.
  
     0.558
SHN14089.1
Phosphotransferase enzyme family protein.
       0.501
SHN11919.1
Transcriptional regulator, GntR family.
  
     0.479
SHN30675.1
Transcriptional regulator, GntR family.
  
     0.463
SHK99162.1
Transcriptional regulator, AraC family.
   
    0.436
SHK76470.1
DNA-binding transcriptional regulator, MerR family.
  
    0.430
SHN08723.1
Predicted transcriptional regulator, ArsR family.
   
    0.430
SHN14098.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
       0.418
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.