STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN13477.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (549 aa)    
Predicted Functional Partners:
SHN13490.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.985
SHN13505.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 
  0.976
SHL20917.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.955
SHM34900.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 
  0.943
SHM34867.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.938
SHL20881.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 
  0.927
SHM34834.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
  
 
0.839
SHM32398.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.815
SHN14482.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.815
SHM60422.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 0.773
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.