STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN14246.1Serine phosphatase RsbU, regulator of sigma subunit. (431 aa)    
Predicted Functional Partners:
SHN25216.1
Signal transduction histidine kinase.
 
 
 0.881
SHN17820.1
Multi-sensor signal transduction histidine kinase.
 
     0.759
SHM07287.1
PAS/PAC sensor hybrid histidine kinase.
 
 
0.757
SHM50345.1
HAMP domain-containing protein.
 
     0.756
SHN17834.1
Response regulator receiver domain-containing protein.
 
   
 0.717
SHM50308.1
Response regulator receiver domain-containing protein.
 
   
 0.716
SHL99969.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
   0.704
SHN04327.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
  0.702
SHN31547.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.681
SHN27776.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
     0.664
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.