STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN14449.1Uncharacterized membrane protein YphA, DoxX/SURF4 family. (540 aa)    
Predicted Functional Partners:
SHL03657.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.869
SHL04004.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.869
SHL30521.1
Sulfite reductase [NADPH] flavoprotein, alpha-component; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.858
SHL85291.1
Bacterioferritin-associated ferredoxin.
  
 
 0.857
SHN13917.1
Hypothetical protein.
  
     0.773
SHM76466.1
Hypothetical protein.
  
     0.772
SHL77976.1
Hypothetical protein.
  
    0.771
SHL98232.1
Xanthomonas XOO_2897-like deaminase.
  
     0.771
SHL00472.1
Transcriptional attenuator, LytR family.
  
     0.770
SHN14436.1
23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.770
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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