Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK77268.1 | SHK77332.1 | SAMN05216499_101599 | SAMN05216499_101600 | Uncharacterized protein. | HEXXH motif-containing protein. | 0.977 |
SHK77268.1 | SHN15440.1 | SAMN05216499_101599 | SAMN05216499_12312 | Uncharacterized protein. | Arylsulfatase A. | 0.805 |
SHK77332.1 | SHK77268.1 | SAMN05216499_101600 | SAMN05216499_101599 | HEXXH motif-containing protein. | Uncharacterized protein. | 0.977 |
SHK77332.1 | SHN15440.1 | SAMN05216499_101600 | SAMN05216499_12312 | HEXXH motif-containing protein. | Arylsulfatase A. | 0.793 |
SHM24702.1 | SHN15440.1 | SAMN05216499_109190 | SAMN05216499_12312 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Arylsulfatase A. | 0.952 |
SHM24702.1 | egtB | SAMN05216499_109190 | SAMN05216499_12612 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | iron(II)-dependent oxidoreductase; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma-L- glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine; Belongs to the EgtB family. | 0.517 |
SHN05636.1 | SHN15440.1 | SAMN05216499_11980 | SAMN05216499_12312 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Arylsulfatase A. | 0.981 |
SHN15440.1 | SHK77268.1 | SAMN05216499_12312 | SAMN05216499_101599 | Arylsulfatase A. | Uncharacterized protein. | 0.805 |
SHN15440.1 | SHK77332.1 | SAMN05216499_12312 | SAMN05216499_101600 | Arylsulfatase A. | HEXXH motif-containing protein. | 0.793 |
SHN15440.1 | SHM24702.1 | SAMN05216499_12312 | SAMN05216499_109190 | Arylsulfatase A. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.952 |
SHN15440.1 | SHN05636.1 | SAMN05216499_12312 | SAMN05216499_11980 | Arylsulfatase A. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.981 |
SHN15440.1 | SHN15451.1 | SAMN05216499_12312 | SAMN05216499_12313 | Arylsulfatase A. | NitT/TauT family transport system substrate-binding protein. | 0.919 |
SHN15440.1 | SHN15474.1 | SAMN05216499_12312 | SAMN05216499_12315 | Arylsulfatase A. | NitT/TauT family transport system permease protein. | 0.827 |
SHN15440.1 | SHN15487.1 | SAMN05216499_12312 | SAMN05216499_12316 | Arylsulfatase A. | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | 0.768 |
SHN15440.1 | SHN15500.1 | SAMN05216499_12312 | SAMN05216499_12317 | Arylsulfatase A. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.986 |
SHN15440.1 | egtB | SAMN05216499_12312 | SAMN05216499_12612 | Arylsulfatase A. | iron(II)-dependent oxidoreductase; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma-L- glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine; Belongs to the EgtB family. | 0.709 |
SHN15440.1 | glgC | SAMN05216499_12312 | SAMN05216499_10488 | Arylsulfatase A. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.768 |
SHN15451.1 | SHN15440.1 | SAMN05216499_12313 | SAMN05216499_12312 | NitT/TauT family transport system substrate-binding protein. | Arylsulfatase A. | 0.919 |
SHN15451.1 | SHN15474.1 | SAMN05216499_12313 | SAMN05216499_12315 | NitT/TauT family transport system substrate-binding protein. | NitT/TauT family transport system permease protein. | 0.947 |
SHN15451.1 | SHN15487.1 | SAMN05216499_12313 | SAMN05216499_12316 | NitT/TauT family transport system substrate-binding protein. | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | 0.443 |
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