STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN16840.1Transcriptional regulator, TetR family. (204 aa)    
Predicted Functional Partners:
SHN16826.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.858
SHM38545.1
Hypothetical protein.
  
     0.662
SHL61831.1
Hypothetical protein.
  
     0.634
SHL08831.1
Conserved hypothetical protein.
  
     0.534
SHN16856.1
ABC-2 type transport system ATP-binding protein.
       0.523
SHN16869.1
ABC-2 type transport system permease protein.
       0.523
SHN29171.1
Mannosyltransferase.
  
     0.505
SHN30586.1
Pentapeptide repeat-containing protein.
  
     0.479
SHK94689.1
Beta-1,3-glucanase.
  
     0.461
SHL25539.1
Acetyltransferase (GNAT) family protein.
  
     0.456
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.