STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN16322.1Predicted transcriptional regulator. (127 aa)    
Predicted Functional Partners:
SHN16334.1
N-acetylglutamate synthase.
       0.883
SHN16312.1
Hypothetical protein.
       0.813
SHN16345.1
Lsr2 protein.
       0.795
SHM81275.1
Peptidase family M48.
 
 
  0.794
SHL48196.1
Peptidase family M48.
 
    0.773
SHN16302.1
Hypothetical protein.
       0.754
SHM32985.1
Peptidase family M48.
 
 
  0.751
SHM33022.1
Predicted transcriptional regulator.
  
     0.711
SHN16279.1
Nicotinate-nucleotide pyrophosphorylase [carboxylating].
       0.706
coaX
Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.706
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.