STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN16356.1Hypothetical protein. (194 aa)    
Predicted Functional Partners:
SHK98782.1
Dihydrofolate synthase / folylpolyglutamate synthase.
  
    0.546
SHK76233.1
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Belongs to the sigma-70 factor family.
  
 
 0.513
SHL32190.1
RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.
  
 
 0.513
SHL32226.1
RNA polymerase, sigma 54 subunit, SigL; Belongs to the sigma-70 factor family.
  
 
 0.513
SHL41505.1
RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.
  
 
 0.513
SHL99898.1
RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.
  
 
 0.513
SHM42764.1
RNA polymerase, sigma 37 subunit, RpsB/SigB; Belongs to the sigma-70 factor family.
  
 
 0.513
SHM68450.1
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
 
 0.513
SHM79965.1
RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.
  
 
 0.513
SHM80449.1
RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.
  
 
 0.513
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.