Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK59203.1 | SHK63837.1 | SAMN05216499_101120 | SAMN05216499_101234 | Helix-turn-helix domain-containing protein. | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family. | 0.456 |
SHK59203.1 | SHL51691.1 | SAMN05216499_101120 | SAMN05216499_104318 | Helix-turn-helix domain-containing protein. | Signal transduction histidine kinase. | 0.548 |
SHK59203.1 | SHM71038.1 | SAMN05216499_101120 | SAMN05216499_113148 | Helix-turn-helix domain-containing protein. | Signal transduction histidine kinase. | 0.595 |
SHK59203.1 | SHN16453.1 | SAMN05216499_101120 | SAMN05216499_12391 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.602 |
SHK63837.1 | SHK59203.1 | SAMN05216499_101234 | SAMN05216499_101120 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family. | Helix-turn-helix domain-containing protein. | 0.456 |
SHK63837.1 | SHL02558.1 | SAMN05216499_101234 | SAMN05216499_102350 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family. | Helix-turn-helix domain-containing protein. | 0.445 |
SHK63837.1 | SHN16453.1 | SAMN05216499_101234 | SAMN05216499_12391 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family. | Hypothetical protein. | 0.656 |
SHL02558.1 | SHK63837.1 | SAMN05216499_102350 | SAMN05216499_101234 | Helix-turn-helix domain-containing protein. | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family. | 0.445 |
SHL02558.1 | SHL51691.1 | SAMN05216499_102350 | SAMN05216499_104318 | Helix-turn-helix domain-containing protein. | Signal transduction histidine kinase. | 0.627 |
SHL02558.1 | SHM71038.1 | SAMN05216499_102350 | SAMN05216499_113148 | Helix-turn-helix domain-containing protein. | Signal transduction histidine kinase. | 0.676 |
SHL02558.1 | SHN16453.1 | SAMN05216499_102350 | SAMN05216499_12391 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.646 |
SHL51691.1 | SHK59203.1 | SAMN05216499_104318 | SAMN05216499_101120 | Signal transduction histidine kinase. | Helix-turn-helix domain-containing protein. | 0.548 |
SHL51691.1 | SHL02558.1 | SAMN05216499_104318 | SAMN05216499_102350 | Signal transduction histidine kinase. | Helix-turn-helix domain-containing protein. | 0.627 |
SHL51691.1 | SHL94765.1 | SAMN05216499_104318 | SAMN05216499_10772 | Signal transduction histidine kinase. | Helix-turn-helix domain-containing protein. | 0.711 |
SHL51691.1 | SHM59862.1 | SAMN05216499_104318 | SAMN05216499_112136 | Signal transduction histidine kinase. | Helix-turn-helix domain-containing protein. | 0.681 |
SHL51691.1 | SHN16453.1 | SAMN05216499_104318 | SAMN05216499_12391 | Signal transduction histidine kinase. | Hypothetical protein. | 0.561 |
SHL94765.1 | SHL51691.1 | SAMN05216499_10772 | SAMN05216499_104318 | Helix-turn-helix domain-containing protein. | Signal transduction histidine kinase. | 0.711 |
SHL94765.1 | SHM71038.1 | SAMN05216499_10772 | SAMN05216499_113148 | Helix-turn-helix domain-containing protein. | Signal transduction histidine kinase. | 0.711 |
SHL94765.1 | SHN16453.1 | SAMN05216499_10772 | SAMN05216499_12391 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.625 |
SHM59862.1 | SHL51691.1 | SAMN05216499_112136 | SAMN05216499_104318 | Helix-turn-helix domain-containing protein. | Signal transduction histidine kinase. | 0.681 |
page 1 of 3