Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN16423.1 | SHN16433.1 | SAMN05216499_12388 | SAMN05216499_12389 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.709 |
SHN16423.1 | SHN16444.1 | SAMN05216499_12388 | SAMN05216499_12390 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | Acetyltransferase (GNAT) family protein. | 0.627 |
SHN16423.1 | SHN16453.1 | SAMN05216499_12388 | SAMN05216499_12391 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.670 |
SHN16423.1 | SHN16463.1 | SAMN05216499_12388 | SAMN05216499_12392 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.403 |
SHN16423.1 | SHN16473.1 | SAMN05216499_12388 | SAMN05216499_12393 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.403 |
SHN16423.1 | SHN16485.1 | SAMN05216499_12388 | SAMN05216499_12394 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.489 |
SHN16433.1 | SHN16423.1 | SAMN05216499_12389 | SAMN05216499_12388 | Hypothetical protein. | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | 0.709 |
SHN16433.1 | SHN16444.1 | SAMN05216499_12389 | SAMN05216499_12390 | Hypothetical protein. | Acetyltransferase (GNAT) family protein. | 0.682 |
SHN16433.1 | SHN16453.1 | SAMN05216499_12389 | SAMN05216499_12391 | Hypothetical protein. | Hypothetical protein. | 0.672 |
SHN16433.1 | SHN16463.1 | SAMN05216499_12389 | SAMN05216499_12392 | Hypothetical protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.432 |
SHN16433.1 | SHN16473.1 | SAMN05216499_12389 | SAMN05216499_12393 | Hypothetical protein. | Hypothetical protein. | 0.432 |
SHN16433.1 | SHN16485.1 | SAMN05216499_12389 | SAMN05216499_12394 | Hypothetical protein. | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.427 |
SHN16444.1 | SHN16423.1 | SAMN05216499_12390 | SAMN05216499_12388 | Acetyltransferase (GNAT) family protein. | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | 0.627 |
SHN16444.1 | SHN16433.1 | SAMN05216499_12390 | SAMN05216499_12389 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.682 |
SHN16444.1 | SHN16453.1 | SAMN05216499_12390 | SAMN05216499_12391 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.860 |
SHN16444.1 | SHN16463.1 | SAMN05216499_12390 | SAMN05216499_12392 | Acetyltransferase (GNAT) family protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.484 |
SHN16444.1 | SHN16473.1 | SAMN05216499_12390 | SAMN05216499_12393 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.482 |
SHN16444.1 | SHN16485.1 | SAMN05216499_12390 | SAMN05216499_12394 | Acetyltransferase (GNAT) family protein. | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.477 |
SHN16444.1 | SHN16496.1 | SAMN05216499_12390 | SAMN05216499_12395 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.416 |
SHN16453.1 | SHN16423.1 | SAMN05216499_12391 | SAMN05216499_12388 | Hypothetical protein. | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | 0.670 |
page 1 of 3