STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN18065.1Hydrogenase nickel incorporation protein HypB. (284 aa)    
Predicted Functional Partners:
hypA
Hydrogenase-3 nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.997
SHN18021.1
Hydrogenase maturation protein HypC.
 
  
 0.990
ureF
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
  
 
 0.990
SHN18007.1
Hydrogenase maturation protein HypD.
 
  
 0.989
SHN18036.1
Hydrogenase maturation protein HypF.
 
   
 0.978
SHN17991.1
Hydrogenase maturation protein, carbamoyl dehydratase HypE.
 
  
 0.969
SHN18194.1
Hydrogenase small subunit.
 
  
 0.953
SHN18109.1
Hydrogenase maturation protease.
 
   
 0.947
SHN18180.1
Hydrogenase large subunit.
 
   
 0.929
ureD
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
  
 
 0.917
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.