STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN19504.1Esterase, PHB depolymerase family. (451 aa)    
Predicted Functional Partners:
SHN30195.1
Glycosyl hydrolase family 62.
 
 
   0.847
SHN10282.1
Cellulose binding domain-containing protein.
 
 
   0.846
SHN38012.1
Endo-1,4-beta-xylanase (glycosyl hydrolase family 10).
 
   0.801
SHM86886.1
Endo-1,4-beta-xylanase (glycosyl hydrolase family 10).
 
   0.769
SHN38570.1
Endo-1,4-beta-xylanase (glycosyl hydrolase family 10).
 
   0.767
SHN00612.1
Endo-1,4-beta-xylanase.
 
   0.733
SHM93253.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
     0.727
SHL08905.1
Cellulose binding domain-containing protein; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
 
     0.726
SHN32320.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
     0.724
SHN35482.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
     0.724
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.