Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK54753.1 | SHL04004.1 | SAMN05216499_1012 | SAMN05216499_102386 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.697 |
SHK54753.1 | SHM13096.1 | SAMN05216499_1012 | SAMN05216499_108197 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.999 |
SHK54753.1 | SHN20711.1 | SAMN05216499_1012 | SAMN05216499_12585 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Ferredoxin. | 0.763 |
SHK54753.1 | SHN32032.1 | SAMN05216499_1012 | SAMN05216499_13716 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.987 |
SHK65027.1 | SHN20711.1 | SAMN05216499_101267 | SAMN05216499_12585 | Transcriptional regulator, TetR family. | Ferredoxin. | 0.458 |
SHL04004.1 | SHK54753.1 | SAMN05216499_102386 | SAMN05216499_1012 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.697 |
SHL04004.1 | SHL85053.1 | SAMN05216499_102386 | SAMN05216499_106240 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.929 |
SHL04004.1 | SHM13096.1 | SAMN05216499_102386 | SAMN05216499_108197 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.697 |
SHL04004.1 | SHN20697.1 | SAMN05216499_102386 | SAMN05216499_12584 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | Cytochrome P450. | 0.450 |
SHL04004.1 | SHN20711.1 | SAMN05216499_102386 | SAMN05216499_12585 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | Ferredoxin. | 0.797 |
SHL85053.1 | SHL04004.1 | SAMN05216499_106240 | SAMN05216499_102386 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.929 |
SHL85053.1 | SHN20711.1 | SAMN05216499_106240 | SAMN05216499_12585 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | Ferredoxin. | 0.473 |
SHL85053.1 | SHN21889.1 | SAMN05216499_106240 | SAMN05216499_12674 | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | Rieske [2Fe-2S] domain-containing protein. | 0.482 |
SHM13096.1 | SHK54753.1 | SAMN05216499_108197 | SAMN05216499_1012 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.999 |
SHM13096.1 | SHL04004.1 | SAMN05216499_108197 | SAMN05216499_102386 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.697 |
SHM13096.1 | SHN20711.1 | SAMN05216499_108197 | SAMN05216499_12585 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Ferredoxin. | 0.763 |
SHM13096.1 | SHN32032.1 | SAMN05216499_108197 | SAMN05216499_13716 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.987 |
SHM76623.1 | SHN20711.1 | SAMN05216499_11433 | SAMN05216499_12585 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Ferredoxin. | 0.471 |
SHN20697.1 | SHL04004.1 | SAMN05216499_12584 | SAMN05216499_102386 | Cytochrome P450. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.450 |
SHN20697.1 | SHN20711.1 | SAMN05216499_12584 | SAMN05216499_12585 | Cytochrome P450. | Ferredoxin. | 0.850 |
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