STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN20711.1Ferredoxin. (71 aa)    
Predicted Functional Partners:
SHN20697.1
Cytochrome P450.
 
  
 0.850
SHL04004.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
 0.797
SHK54753.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.763
SHM13096.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.763
SHN32032.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.702
SHL85053.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
 0.473
SHM76623.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.471
SHN21832.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
  
    0.471
SHK65027.1
Transcriptional regulator, TetR family.
  
     0.458
SHN21889.1
Rieske [2Fe-2S] domain-containing protein.
 
  
  0.415
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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