STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN21458.1Zinc-ribbon domain-containing protein. (565 aa)    
Predicted Functional Partners:
SHK77416.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.990
SHN15618.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.990
SHL60243.1
Serine/threonine protein kinase.
   
 
 0.938
SHL60288.1
Serine/threonine protein kinase.
   
 
 0.938
SHL85190.1
Serine/threonine protein kinase.
   
 
 0.938
SHN25216.1
Signal transduction histidine kinase.
  
 
 0.844
SHL82262.1
Glutamate synthase (NADH) large subunit.
    
   0.757
SHM07287.1
PAS/PAC sensor hybrid histidine kinase.
  
 
  0.741
SHN34319.1
Hypothetical protein.
  
  0.718
SHM89991.1
Regulator of chromosome condensation (RCC1) repeat-containing protein.
    
  0.682
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.