STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN21851.1Ricin-type beta-trefoil lectin domain-containing protein. (395 aa)    
Predicted Functional Partners:
SHM46911.1
Endoglucanase.
  
 
  0.859
SHN00453.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
   
 0.742
SHL11323.1
Right handed beta helix region.
  
 
  0.640
SHL88243.1
Fibronectin type III domain-containing protein.
  
 
   0.632
SHN19946.1
Pectate lyase superfamily protein.
  
  0.611
SHN08108.1
Glycosyl hydrolase family 12; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
 
   0.592
SHK67976.1
Hypothetical protein.
    
   0.588
SHK67311.1
Pectate lyase superfamily protein.
  
 
  0.587
SHM47027.1
Kelch motif-containing protein.
 
  
  0.585
SHM23795.1
Kelch motif-containing protein.
 
  
  0.578
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.