Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK76876.1 | SHN22862.1 | SAMN05216499_101590 | SAMN05216499_12747 | Molecular chaperone DnaK. | Putative hydrolase of the HAD superfamily. | 0.924 |
SHK76876.1 | SHN25216.1 | SAMN05216499_101590 | SAMN05216499_1296 | Molecular chaperone DnaK. | Signal transduction histidine kinase. | 0.953 |
SHK76876.1 | SHN37779.1 | SAMN05216499_101590 | SAMN05216499_1564 | Molecular chaperone DnaK. | Mannose-1-phosphate guanylyltransferase / phosphomannomutase. | 0.547 |
SHK76876.1 | guaB | SAMN05216499_101590 | SAMN05216499_101195 | Molecular chaperone DnaK. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.690 |
SHL68469.1 | SHL87061.1 | SAMN05216499_105287 | SAMN05216499_106300 | Putative serine protease PepD. | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | 0.769 |
SHL68469.1 | SHN13860.1 | SAMN05216499_105287 | SAMN05216499_12236 | Putative serine protease PepD. | Putative serine protease PepD. | 0.931 |
SHL68469.1 | SHN22862.1 | SAMN05216499_105287 | SAMN05216499_12747 | Putative serine protease PepD. | Putative hydrolase of the HAD superfamily. | 0.906 |
SHL68469.1 | SHN25216.1 | SAMN05216499_105287 | SAMN05216499_1296 | Putative serine protease PepD. | Signal transduction histidine kinase. | 0.707 |
SHL68469.1 | SHN31380.1 | SAMN05216499_105287 | SAMN05216499_13613 | Putative serine protease PepD. | Colicin V production protein. | 0.448 |
SHL87061.1 | SHL68469.1 | SAMN05216499_106300 | SAMN05216499_105287 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Putative serine protease PepD. | 0.769 |
SHL87061.1 | SHN13860.1 | SAMN05216499_106300 | SAMN05216499_12236 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Putative serine protease PepD. | 0.783 |
SHL87061.1 | SHN22862.1 | SAMN05216499_106300 | SAMN05216499_12747 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Putative hydrolase of the HAD superfamily. | 0.906 |
SHL87061.1 | SHN25216.1 | SAMN05216499_106300 | SAMN05216499_1296 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Signal transduction histidine kinase. | 0.707 |
SHL87061.1 | SHN31380.1 | SAMN05216499_106300 | SAMN05216499_13613 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Colicin V production protein. | 0.448 |
SHM66700.1 | SHN22862.1 | SAMN05216499_11334 | SAMN05216499_12747 | Hypothetical protein. | Putative hydrolase of the HAD superfamily. | 0.906 |
SHM66700.1 | SHN25216.1 | SAMN05216499_11334 | SAMN05216499_1296 | Hypothetical protein. | Signal transduction histidine kinase. | 0.707 |
SHN13860.1 | SHL68469.1 | SAMN05216499_12236 | SAMN05216499_105287 | Putative serine protease PepD. | Putative serine protease PepD. | 0.931 |
SHN13860.1 | SHL87061.1 | SAMN05216499_12236 | SAMN05216499_106300 | Putative serine protease PepD. | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | 0.783 |
SHN13860.1 | SHN22862.1 | SAMN05216499_12236 | SAMN05216499_12747 | Putative serine protease PepD. | Putative hydrolase of the HAD superfamily. | 0.906 |
SHN13860.1 | SHN25216.1 | SAMN05216499_12236 | SAMN05216499_1296 | Putative serine protease PepD. | Signal transduction histidine kinase. | 0.707 |
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