Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHN22832.1 | SHN22842.1 | SAMN05216499_12744 | SAMN05216499_12745 | Hypothetical protein. | Hypothetical protein. | 0.623 |
SHN22832.1 | SHN22851.1 | SAMN05216499_12744 | SAMN05216499_12746 | Hypothetical protein. | DNA-binding transcriptional regulator, XRE family. | 0.623 |
SHN22832.1 | SHN22862.1 | SAMN05216499_12744 | SAMN05216499_12747 | Hypothetical protein. | Putative hydrolase of the HAD superfamily. | 0.416 |
SHN22832.1 | SHN22872.1 | SAMN05216499_12744 | SAMN05216499_12748 | Hypothetical protein. | Hypothetical protein. | 0.416 |
SHN22832.1 | SHN22881.1 | SAMN05216499_12744 | SAMN05216499_12749 | Hypothetical protein. | DNA-binding transcriptional regulator, XRE family. | 0.416 |
SHN22832.1 | SHN22889.1 | SAMN05216499_12744 | SAMN05216499_12750 | Hypothetical protein. | Site-specific recombinase XerD. | 0.400 |
SHN22842.1 | SHN22832.1 | SAMN05216499_12745 | SAMN05216499_12744 | Hypothetical protein. | Hypothetical protein. | 0.623 |
SHN22842.1 | SHN22851.1 | SAMN05216499_12745 | SAMN05216499_12746 | Hypothetical protein. | DNA-binding transcriptional regulator, XRE family. | 0.830 |
SHN22842.1 | SHN22862.1 | SAMN05216499_12745 | SAMN05216499_12747 | Hypothetical protein. | Putative hydrolase of the HAD superfamily. | 0.517 |
SHN22842.1 | SHN22872.1 | SAMN05216499_12745 | SAMN05216499_12748 | Hypothetical protein. | Hypothetical protein. | 0.503 |
SHN22842.1 | SHN22881.1 | SAMN05216499_12745 | SAMN05216499_12749 | Hypothetical protein. | DNA-binding transcriptional regulator, XRE family. | 0.576 |
SHN22842.1 | SHN22889.1 | SAMN05216499_12745 | SAMN05216499_12750 | Hypothetical protein. | Site-specific recombinase XerD. | 0.782 |
SHN22851.1 | SHN22832.1 | SAMN05216499_12746 | SAMN05216499_12744 | DNA-binding transcriptional regulator, XRE family. | Hypothetical protein. | 0.623 |
SHN22851.1 | SHN22842.1 | SAMN05216499_12746 | SAMN05216499_12745 | DNA-binding transcriptional regulator, XRE family. | Hypothetical protein. | 0.830 |
SHN22851.1 | SHN22862.1 | SAMN05216499_12746 | SAMN05216499_12747 | DNA-binding transcriptional regulator, XRE family. | Putative hydrolase of the HAD superfamily. | 0.503 |
SHN22851.1 | SHN22872.1 | SAMN05216499_12746 | SAMN05216499_12748 | DNA-binding transcriptional regulator, XRE family. | Hypothetical protein. | 0.611 |
SHN22851.1 | SHN22881.1 | SAMN05216499_12746 | SAMN05216499_12749 | DNA-binding transcriptional regulator, XRE family. | DNA-binding transcriptional regulator, XRE family. | 0.713 |
SHN22851.1 | SHN22889.1 | SAMN05216499_12746 | SAMN05216499_12750 | DNA-binding transcriptional regulator, XRE family. | Site-specific recombinase XerD. | 0.663 |
SHN22851.1 | guaA | SAMN05216499_12746 | SAMN05216499_101206 | DNA-binding transcriptional regulator, XRE family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.692 |
SHN22862.1 | SHN22832.1 | SAMN05216499_12747 | SAMN05216499_12744 | Putative hydrolase of the HAD superfamily. | Hypothetical protein. | 0.416 |
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