STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN23942.1Transcriptional regulator, GntR family. (252 aa)    
Predicted Functional Partners:
SHN11919.1
Transcriptional regulator, GntR family.
  
     0.772
SHK56915.1
Transcriptional regulator, GntR family.
  
     0.755
SHN23927.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.740
SHL69469.1
Transcriptional regulator, GntR family.
  
     0.725
SHK56991.1
GntR family transcriptional regulator.
  
     0.721
SHK56815.1
Transcriptional regulator, GntR family.
  
     0.720
SHN14656.1
Regulatory protein, gntR family.
  
     0.652
SHL76886.1
DNA-binding transcriptional regulator, FadR family.
  
    0.526
SHM47068.1
DNA-binding transcriptional regulator, FadR family.
  
    0.487
SHM31475.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.460
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.