STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN23665.1Transmembrane secretion effector. (428 aa)    
Predicted Functional Partners:
SHM37045.1
Predicted arabinose efflux permease, MFS family.
  
     0.744
SHL40353.1
Predicted arabinose efflux permease, MFS family.
  
     0.714
SHM84526.1
Predicted arabinose efflux permease, MFS family.
  
     0.707
SHL01089.1
Predicted arabinose efflux permease, MFS family.
  
     0.668
SHM07860.1
Predicted arabinose efflux permease, MFS family.
  
     0.623
SHM07944.1
Predicted arabinose efflux permease, MFS family.
  
     0.616
SHN23676.1
Hypothetical protein.
       0.602
SHN23702.1
Membrane protein DedA, SNARE-associated domain.
 
     0.513
SHN23688.1
Protein of unknown function.
       0.501
SHK98313.1
Predicted acetyltransferase.
   
    0.431
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.