STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN24752.1precorrin-6A synthase (deacetylating). (271 aa)    
Predicted Functional Partners:
SHN24763.1
precorrin-6A/cobalt-precorrin-6A reductase.
 
 
 0.999
SHL78586.1
Precorrin-4 C11-methyltransferase.
  
 
 0.997
SHL78671.1
Cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase.
  
 
 0.996
SHL78715.1
precorrin-8X methylmutase.
 
 
 0.941
cobQ
Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.909
SHL78629.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
  
 
 0.907
SHM49324.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
  
 
 0.907
SHN24728.1
Probable cobalt transporter subunit (CbtA).
 
     0.891
SHM49407.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
    
 0.858
SHN24739.1
Ferric iron reductase FhuF-like transporter.
 
     0.815
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.