SHN25272.1 protein (Streptomyces paucisporeus)

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

SHN25272.1

Helix-turn-helix domain-containing protein. (133 aa)

Predicted Functional Partners:

SHN25281.1

0.783

rimO

0.776

SHN25253.1

0.776

SHN20308.1

0.735

SHN25239.1

0.731

rbpA-2

0.729

SHL64158.1

0.715

SHL83881.1

0.701

SHL01166.1

0.698

SHN37813.1

0.697

Your Current Organism:

Streptomyces paucisporeus

NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SHL01166.1	SHL64158.1	SAMN05216499_102316	SAMN05216499_105185	DNA polymerase III, delta subunit.	Transmembrane protein of unknown function.	0.534
SHL01166.1	SHL83881.1	SAMN05216499_102316	SAMN05216499_106208	DNA polymerase III, delta subunit.	YggT family protein.	0.768
SHL01166.1	SHN20308.1	SAMN05216499_102316	SAMN05216499_12559	DNA polymerase III, delta subunit.	Protein of unknown function.	0.717
SHL01166.1	SHN25272.1	SAMN05216499_102316	SAMN05216499_12913	DNA polymerase III, delta subunit.	Helix-turn-helix domain-containing protein.	0.698
SHL01166.1	SHN37813.1	SAMN05216499_102316	SAMN05216499_15611	DNA polymerase III, delta subunit.	MerR HTH family regulatory protein.	0.737
SHL01166.1	rbpA-2	SAMN05216499_102316	SAMN05216499_13218	DNA polymerase III, delta subunit.	RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.739
SHL64158.1	SHL01166.1	SAMN05216499_105185	SAMN05216499_102316	Transmembrane protein of unknown function.	DNA polymerase III, delta subunit.	0.534
SHL64158.1	SHL83881.1	SAMN05216499_105185	SAMN05216499_106208	Transmembrane protein of unknown function.	YggT family protein.	0.647
SHL64158.1	SHN20308.1	SAMN05216499_105185	SAMN05216499_12559	Transmembrane protein of unknown function.	Protein of unknown function.	0.682
SHL64158.1	SHN25272.1	SAMN05216499_105185	SAMN05216499_12913	Transmembrane protein of unknown function.	Helix-turn-helix domain-containing protein.	0.715
SHL64158.1	SHN37813.1	SAMN05216499_105185	SAMN05216499_15611	Transmembrane protein of unknown function.	MerR HTH family regulatory protein.	0.569
SHL64158.1	rbpA-2	SAMN05216499_105185	SAMN05216499_13218	Transmembrane protein of unknown function.	RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.728
SHL83881.1	SHL01166.1	SAMN05216499_106208	SAMN05216499_102316	YggT family protein.	DNA polymerase III, delta subunit.	0.768
SHL83881.1	SHL64158.1	SAMN05216499_106208	SAMN05216499_105185	YggT family protein.	Transmembrane protein of unknown function.	0.647
SHL83881.1	SHN20308.1	SAMN05216499_106208	SAMN05216499_12559	YggT family protein.	Protein of unknown function.	0.755
SHL83881.1	SHN25272.1	SAMN05216499_106208	SAMN05216499_12913	YggT family protein.	Helix-turn-helix domain-containing protein.	0.701
SHL83881.1	SHN37813.1	SAMN05216499_106208	SAMN05216499_15611	YggT family protein.	MerR HTH family regulatory protein.	0.705
SHL83881.1	rbpA-2	SAMN05216499_106208	SAMN05216499_13218	YggT family protein.	RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.765
SHN20308.1	SHL01166.1	SAMN05216499_12559	SAMN05216499_102316	Protein of unknown function.	DNA polymerase III, delta subunit.	0.717
SHN20308.1	SHL64158.1	SAMN05216499_12559	SAMN05216499_105185	Protein of unknown function.	Transmembrane protein of unknown function.	0.682