STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN25571.1Siderophore synthetase component. (617 aa)    
Predicted Functional Partners:
SHN25597.1
Siderophore synthetase component.
  
  0.972
SHN25582.1
Protein N-acetyltransferase, RimJ/RimL family.
 
 
 0.966
SHL82088.1
Lysine N6-hydroxylase.
 
 
 0.959
SHN25560.1
Diaminobutyrate aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.871
SHN15964.1
L-ornithine N5-oxygenase.
 
 
 0.770
SHM85564.1
Diaminopimelate decarboxylase.
  
 
 0.750
SHL82119.1
L-2,4-diaminobutyrate decarboxylase.
 
  
 0.720
SHN02347.1
Hypothetical protein.
       0.603
SHN25634.1
ATP-dependent DNA helicase DinG.
       0.603
SHL99729.1
Diaminopimelate decarboxylase.
 
 
 0.514
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.