STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN28762.1Ricin-type beta-trefoil lectin domain-containing protein. (474 aa)    
Predicted Functional Partners:
SHN28751.1
O-Glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
    
0.658
SHM19514.1
Cellulose binding domain-containing protein.
  
     0.622
SHN30151.1
Ricin-type beta-trefoil lectin domain-like.
  
     0.587
SHN30142.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.572
SHL27225.1
Condensation domain-containing protein.
  
     0.564
SHN28740.1
Cellulose binding domain-containing protein.
 
     0.526
SHK94794.1
Cellulase (glycosyl hydrolase family 5).
  
     0.501
SHL88243.1
Fibronectin type III domain-containing protein.
  
     0.478
SHN02437.1
Hypothetical protein.
  
    0.474
SHL41459.1
Hypothetical protein.
  
     0.469
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
Server load: low (24%) [HD]