STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN29148.1Hypothetical protein. (480 aa)    
Predicted Functional Partners:
SHM46911.1
Endoglucanase.
    
  0.834
SHN00453.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
    
 0.636
SHK67976.1
Hypothetical protein.
    
   0.588
SHN19946.1
Pectate lyase superfamily protein.
   
  0.516
SHN29160.1
Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
       0.494
SHN29171.1
Mannosyltransferase.
       0.494
SHN29183.1
Beta-mannanase; Belongs to the glycosyl hydrolase 26 family.
       0.494
SHN24189.1
Protein of unknown function.
    
  0.484
SHL01738.1
Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family.
   
   0.469
SHL96756.1
Tricorn protease.
   
   0.469
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.