STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN29051.1Peptidase A4 family protein. (238 aa)    
Predicted Functional Partners:
SHM62593.1
Hypothetical protein.
  
  
  0.760
SHN32909.1
Serine protease.
  
  
  0.760
SHM11119.1
Hypothetical protein.
  
  
  0.756
SHL43689.1
Predicted protein.
  
     0.755
SHN05877.1
BNR repeat-like domain-containing protein.
  
     0.754
SHM09015.1
Right handed beta helix region.
  
     0.749
SHL25334.1
Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin.
  
  
  0.746
SHN26008.1
Hypothetical protein.
  
     0.728
SHL38648.1
Subtilase family protein.
  
     0.720
SHM46951.1
Nitrate/nitrite transporter NarK.
  
     0.689
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.