STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN30866.1Protein-tyrosine phosphatase. (278 aa)    
Predicted Functional Partners:
SHN16752.1
Protein-tyrosine phosphatase.
  
  
 
0.937
SHN08145.1
Protein tyrosine phosphatase.
  
  
 
0.936
SHM10970.1
Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.931
SHN31429.1
Carbonic anhydrase.
   
   0.921
SHN35378.1
Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.917
SHK55222.1
NADH dehydrogenase subunit M.
    
 
 0.901
SHN21300.1
NADH dehydrogenase subunit M.
    
 
 0.901
SHN30832.1
Lysophospholipase L1.
     
 0.892
SHM89991.1
Regulator of chromosome condensation (RCC1) repeat-containing protein.
   
   0.891
SHN34319.1
Hypothetical protein.
   
   0.891
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.