STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN30973.1Teichoic acid transport system ATP-binding protein. (268 aa)    
Predicted Functional Partners:
SHN30987.1
Teichoic acid transport system permease protein.
 
 0.999
SHK90106.1
CDP-glycerol glycerophosphotransferase.
 
 
 0.868
SHK99744.1
CDP-glycerol glycerophosphotransferase, TagB/SpsB family.
 
 
 0.865
SHK90153.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
 
 0.855
SHK89253.1
Predicted amidophosphoribosyltransferases.
   
    0.808
SHK99699.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
 
 0.791
SHK90065.1
CDP-glycerol glycerophosphotransferase.
 
 
 0.772
SHN30998.1
Glycosyltransferase, GT2 family.
 
  
 0.750
SHK99622.1
Glycosyl transferase family 2.
 
 
 0.734
SHM26434.1
Transposase DDE domain group 1.
  
  
 0.730
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.