STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN31046.1Cobalt-zinc-cadmium efflux system protein. (311 aa)    
Predicted Functional Partners:
idi
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
       0.794
SHL00074.1
UDP-galactose 4-epimerase.
       0.603
SHN30998.1
Glycosyltransferase, GT2 family.
       0.603
SHN31007.1
CDP-alcohol phosphatidyltransferase.
       0.603
SHN31017.1
Glycerol-1-phosphate dehydrogenase [NAD(P)+].
       0.603
SHN31027.1
Choline kinase.
       0.603
SHN31036.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.603
SHN30987.1
Teichoic acid transport system permease protein.
       0.538
SHL29612.1
Hypothetical protein.
   
    0.503
SHL19778.1
Hypothetical protein.
   
    0.503
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.