STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN31082.1Predicted ATPase. (675 aa)    
Predicted Functional Partners:
SHM61491.1
DNA-binding transcriptional activator of the SARP family.
 
  
 0.833
SHN32110.1
DNA-binding transcriptional regulator, MarR family.
  
    0.705
SHK78710.1
Transcriptional regulator, HxlR family.
   
    0.688
SHL42146.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
   
    0.673
SHL80030.1
Predicted transcriptional regulator, ArsR family.
   
    0.673
SHM05874.1
DNA-binding transcriptional activator of the SARP family.
 
    0.664
SHK91066.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.643
SHN00096.1
DNA-binding transcriptional activator of the SARP family.
 
    0.640
SHM05679.1
DNA-binding transcriptional activator of the SARP family.
 
    0.636
SHN18426.1
DNA-binding transcriptional activator of the SARP family.
 
    0.618
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.