Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK98269.1 | SHN16552.1 | SAMN05216499_102239 | SAMN05216499_123100 | Endonuclease-8; Belongs to the FPG family. | A/G-specific DNA-adenine glycosylase. | 0.499 |
SHK98269.1 | SHN25301.1 | SAMN05216499_102239 | SAMN05216499_12916 | Endonuclease-8; Belongs to the FPG family. | Endonuclease-8. | 0.935 |
SHK98269.1 | mutM | SAMN05216499_102239 | SAMN05216499_113117 | Endonuclease-8; Belongs to the FPG family. | DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.878 |
SHK98269.1 | nth | SAMN05216499_102239 | SAMN05216499_13611 | Endonuclease-8; Belongs to the FPG family. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.707 |
SHK98269.1 | polA | SAMN05216499_102239 | SAMN05216499_106146 | Endonuclease-8; Belongs to the FPG family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.916 |
SHM56965.1 | SHM59186.1 | SAMN05216499_11258 | SAMN05216499_112117 | Exodeoxyribonuclease-3. | Exodeoxyribonuclease III. | 0.935 |
SHM56965.1 | SHN16552.1 | SAMN05216499_11258 | SAMN05216499_123100 | Exodeoxyribonuclease-3. | A/G-specific DNA-adenine glycosylase. | 0.969 |
SHM56965.1 | nth | SAMN05216499_11258 | SAMN05216499_13611 | Exodeoxyribonuclease-3. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.994 |
SHM56965.1 | polA | SAMN05216499_11258 | SAMN05216499_106146 | Exodeoxyribonuclease-3. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.945 |
SHM59186.1 | SHM56965.1 | SAMN05216499_112117 | SAMN05216499_11258 | Exodeoxyribonuclease III. | Exodeoxyribonuclease-3. | 0.935 |
SHM59186.1 | SHN16552.1 | SAMN05216499_112117 | SAMN05216499_123100 | Exodeoxyribonuclease III. | A/G-specific DNA-adenine glycosylase. | 0.964 |
SHM59186.1 | nth | SAMN05216499_112117 | SAMN05216499_13611 | Exodeoxyribonuclease III. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.949 |
SHM59186.1 | polA | SAMN05216499_112117 | SAMN05216499_106146 | Exodeoxyribonuclease III. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.937 |
SHN16552.1 | SHK98269.1 | SAMN05216499_123100 | SAMN05216499_102239 | A/G-specific DNA-adenine glycosylase. | Endonuclease-8; Belongs to the FPG family. | 0.499 |
SHN16552.1 | SHM56965.1 | SAMN05216499_123100 | SAMN05216499_11258 | A/G-specific DNA-adenine glycosylase. | Exodeoxyribonuclease-3. | 0.969 |
SHN16552.1 | SHM59186.1 | SAMN05216499_123100 | SAMN05216499_112117 | A/G-specific DNA-adenine glycosylase. | Exodeoxyribonuclease III. | 0.964 |
SHN16552.1 | SHN25301.1 | SAMN05216499_123100 | SAMN05216499_12916 | A/G-specific DNA-adenine glycosylase. | Endonuclease-8. | 0.561 |
SHN16552.1 | mutM | SAMN05216499_123100 | SAMN05216499_113117 | A/G-specific DNA-adenine glycosylase. | DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.789 |
SHN16552.1 | nth | SAMN05216499_123100 | SAMN05216499_13611 | A/G-specific DNA-adenine glycosylase. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.782 |
SHN16552.1 | polA | SAMN05216499_123100 | SAMN05216499_106146 | A/G-specific DNA-adenine glycosylase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.551 |
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