STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN31528.1Hypothetical protein. (134 aa)    
Predicted Functional Partners:
SHN31503.1
Flp pilus assembly protein TadB.
 
  
 0.914
SHN31516.1
Protein of unknown function.
  
    0.892
SHN31493.1
Pilus assembly protein CpaF.
  
  
 0.832
SHK68511.1
Pilus assembly protein CpaE.
  
  
 0.799
SHL99352.1
Protein of unknown function.
  
     0.694
SHK68473.1
Pilus assembly protein CpaB.
  
  
 0.668
SHL95785.1
Hypothetical protein.
  
  
 0.668
SHK68629.1
Tight adherence protein B.
  
  
 0.578
SHK68589.1
Pilus assembly protein CpaF.
  
  
 0.540
SHM72040.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
  
 0.540
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.