STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN32145.1Uncharacterized conserved protein, AIM24 family. (216 aa)    
Predicted Functional Partners:
SHN32138.1
Biogenesis AIM24.
 
     0.973
SHN32155.1
Uncharacterized conserved protein, AIM24 family.
 
    
0.898
SHN32162.1
Uncharacterized membrane protein, DUF2068 family.
       0.886
SHN32132.1
DNA-binding transcriptional regulator, MarR family.
       0.815
SHN32170.1
Integral membrane protein.
       0.793
SHN32180.1
Uncharacterized protein, MTH1187 family.
       0.793
SHN32110.1
DNA-binding transcriptional regulator, MarR family.
       0.708
SHN32103.1
Integral membrane protein.
       0.691
SHL06742.1
Hypothetical protein.
  
     0.681
SHL06499.1
Citrate lyase beta subunit.
 
     0.581
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.