STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN32162.1Uncharacterized membrane protein, DUF2068 family. (271 aa)    
Predicted Functional Partners:
SHN32145.1
Uncharacterized conserved protein, AIM24 family.
       0.886
SHN32155.1
Uncharacterized conserved protein, AIM24 family.
       0.886
SHN32138.1
Biogenesis AIM24.
       0.884
SHK96559.1
6-phosphogluconolactonase, cycloisomerase 2 family.
  
     0.731
SHN32170.1
Integral membrane protein.
 
     0.706
SHN24807.1
SPFH domain / Band 7 family protein.
  
     0.670
SHN01091.1
Calcineurin-like phosphoesterase.
  
     0.661
SHM21883.1
Fusaric acid resistance protein-like.
  
     0.659
SHK64345.1
Hypothetical protein.
  
     0.653
SHN32132.1
DNA-binding transcriptional regulator, MarR family.
       0.641
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.