Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL82262.1 | SHM78879.1 | SAMN05216499_106163 | SAMN05216499_11491 | Glutamate synthase (NADH) large subunit. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.790 |
SHL82262.1 | SHN33966.1 | SAMN05216499_106163 | SAMN05216499_14024 | Glutamate synthase (NADH) large subunit. | Hypothetical protein. | 0.948 |
SHL82262.1 | argG | SAMN05216499_106163 | SAMN05216499_111150 | Glutamate synthase (NADH) large subunit. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.939 |
SHL82262.1 | carA | SAMN05216499_106163 | SAMN05216499_14025 | Glutamate synthase (NADH) large subunit. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.966 |
SHL82262.1 | carB | SAMN05216499_106163 | SAMN05216499_14026 | Glutamate synthase (NADH) large subunit. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.987 |
SHL82262.1 | purF | SAMN05216499_106163 | SAMN05216499_103112 | Glutamate synthase (NADH) large subunit. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.972 |
SHL82262.1 | pyrF | SAMN05216499_106163 | SAMN05216499_14028 | Glutamate synthase (NADH) large subunit. | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.604 |
SHM78879.1 | SHL82262.1 | SAMN05216499_11491 | SAMN05216499_106163 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Glutamate synthase (NADH) large subunit. | 0.790 |
SHM78879.1 | SHN33966.1 | SAMN05216499_11491 | SAMN05216499_14024 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Hypothetical protein. | 0.735 |
SHM78879.1 | argG | SAMN05216499_11491 | SAMN05216499_111150 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.985 |
SHM78879.1 | carA | SAMN05216499_11491 | SAMN05216499_14025 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.966 |
SHM78879.1 | carB | SAMN05216499_11491 | SAMN05216499_14026 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.986 |
SHM78879.1 | purF | SAMN05216499_11491 | SAMN05216499_103112 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.443 |
SHM78879.1 | pyrB | SAMN05216499_11491 | SAMN05216499_14022 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.940 |
SHN33966.1 | SHL82262.1 | SAMN05216499_14024 | SAMN05216499_106163 | Hypothetical protein. | Glutamate synthase (NADH) large subunit. | 0.948 |
SHN33966.1 | SHM78879.1 | SAMN05216499_14024 | SAMN05216499_11491 | Hypothetical protein. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.735 |
SHN33966.1 | argG | SAMN05216499_14024 | SAMN05216499_111150 | Hypothetical protein. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.648 |
SHN33966.1 | carA | SAMN05216499_14024 | SAMN05216499_14025 | Hypothetical protein. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.980 |
SHN33966.1 | carB | SAMN05216499_14024 | SAMN05216499_14026 | Hypothetical protein. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.998 |
SHN33966.1 | purF | SAMN05216499_14024 | SAMN05216499_103112 | Hypothetical protein. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.739 |
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