STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN34710.1NAD binding domain of 6-phosphogluconate dehydrogenase. (278 aa)    
Predicted Functional Partners:
SHN34717.1
Putative hydrolase of the HAD superfamily.
       0.812
SHM59274.1
4-carboxymuconolactone decarboxylase.
 
 
  0.646
SHL46129.1
Short chain enoyl-CoA hydratase.
  
 
 0.644
SHM77442.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.644
SHL30126.1
Acetyltransferase (GNAT) family protein.
    
  0.592
SHN19887.1
Acyl-CoA synthetase (NDP forming).
    
  0.592
SHK93525.1
D-lactate dehydrogenase.
    
  0.582
SHL93118.1
FAD/FMN-containing dehydrogenase.
    
  0.582
SHN17669.1
FAD/FMN-containing dehydrogenase.
    
  0.582
SHN18766.1
Helix-turn-helix domain-containing protein.
  
     0.540
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.