STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN34877.1DDE_Tnp_1-associated. (194 aa)    
Predicted Functional Partners:
SHN34861.1
Transposase DDE domain-containing protein.
     0.884
SHN37932.1
Transposase DDE domain-containing protein.
 
     0.785
SHN37357.1
Transposase DDE domain-containing protein.
 
     0.784
SHN26550.1
Transposase DDE domain-containing protein.
     0.780
SHN34868.1
Hypothetical protein.
       0.773
SHN34886.1
Phage integrase, N-terminal SAM-like domain; Belongs to the 'phage' integrase family.
 
     0.586
SHN36184.1
Transposase.
  
     0.510
SHN37332.1
Transposase.
  
     0.504
SHM79198.1
Hypothetical protein.
  
     0.449
SHN37879.1
Transposase.
  
     0.422
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.