Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL41772.1 | SHN29090.1 | SAMN05216499_10489 | SAMN05216499_1338 | Alpha-1,2-mannosidase, putative. | NACHT domain-containing protein. | 0.415 |
SHL41772.1 | SHN35983.1 | SAMN05216499_10489 | SAMN05216499_14511 | Alpha-1,2-mannosidase, putative. | Transcriptional regulator, TetR family. | 0.408 |
SHN29090.1 | SHL41772.1 | SAMN05216499_1338 | SAMN05216499_10489 | NACHT domain-containing protein. | Alpha-1,2-mannosidase, putative. | 0.415 |
SHN29090.1 | SHN35983.1 | SAMN05216499_1338 | SAMN05216499_14511 | NACHT domain-containing protein. | Transcriptional regulator, TetR family. | 0.458 |
SHN35983.1 | SHL41772.1 | SAMN05216499_14511 | SAMN05216499_10489 | Transcriptional regulator, TetR family. | Alpha-1,2-mannosidase, putative. | 0.408 |
SHN35983.1 | SHN29090.1 | SAMN05216499_14511 | SAMN05216499_1338 | Transcriptional regulator, TetR family. | NACHT domain-containing protein. | 0.458 |
SHN35983.1 | SHN35989.1 | SAMN05216499_14511 | SAMN05216499_14512 | Transcriptional regulator, TetR family. | acyl-CoA thioesterase-1. | 0.687 |
SHN35983.1 | SHN35996.1 | SAMN05216499_14511 | SAMN05216499_14513 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.601 |
SHN35983.1 | SHN36002.1 | SAMN05216499_14511 | SAMN05216499_14514 | Transcriptional regulator, TetR family. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.601 |
SHN35983.1 | SHN36008.1 | SAMN05216499_14511 | SAMN05216499_14515 | Transcriptional regulator, TetR family. | Putative NADH-flavin reductase. | 0.426 |
SHN35989.1 | SHN35983.1 | SAMN05216499_14512 | SAMN05216499_14511 | acyl-CoA thioesterase-1. | Transcriptional regulator, TetR family. | 0.687 |
SHN35989.1 | SHN35996.1 | SAMN05216499_14512 | SAMN05216499_14513 | acyl-CoA thioesterase-1. | Hypothetical protein. | 0.814 |
SHN35989.1 | SHN36002.1 | SAMN05216499_14512 | SAMN05216499_14514 | acyl-CoA thioesterase-1. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.773 |
SHN35989.1 | SHN36008.1 | SAMN05216499_14512 | SAMN05216499_14515 | acyl-CoA thioesterase-1. | Putative NADH-flavin reductase. | 0.533 |
SHN35996.1 | SHN35983.1 | SAMN05216499_14513 | SAMN05216499_14511 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.601 |
SHN35996.1 | SHN35989.1 | SAMN05216499_14513 | SAMN05216499_14512 | Hypothetical protein. | acyl-CoA thioesterase-1. | 0.814 |
SHN35996.1 | SHN36002.1 | SAMN05216499_14513 | SAMN05216499_14514 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.773 |
SHN35996.1 | SHN36008.1 | SAMN05216499_14513 | SAMN05216499_14515 | Hypothetical protein. | Putative NADH-flavin reductase. | 0.533 |
SHN36002.1 | SHN35983.1 | SAMN05216499_14514 | SAMN05216499_14511 | 3-oxoacyl-[acyl-carrier protein] reductase. | Transcriptional regulator, TetR family. | 0.601 |
SHN36002.1 | SHN35989.1 | SAMN05216499_14514 | SAMN05216499_14512 | 3-oxoacyl-[acyl-carrier protein] reductase. | acyl-CoA thioesterase-1. | 0.773 |
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